Stem-loop mml-mir-195

Accession

MI0007658

Description

Macaca mulatta mml-mir-195 precursor miRNA mir-15

Gene
family

RF00455; mir-15

Literature search

1 open access papers mention mml-mir-195
(1 sentences)

Sequence

32677 reads, 250 reads per million, 8 experiments

agcuucccuggcucUAGCAGCACAGAAAUAUUGGCacagggaagcaagucugCCAAUAUUGGCUGUGCUGCUCCAggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure

a   u     g  cU          -A          ca  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCa  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac gA  UCGUCGUGUC  UUAUAACCgu  cu   c
g   u     g  CC          GG          --  gaa 

Annotation confidence High

Genome context

chr16: 6978210-6978296 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-195

Mature mml-miR-195-5p

• Accession: MIMAT0006228
• Description: Macaca mulatta mml-miR-195-5p mature miRNA
• Sequence: 15 - UAGCAGCACAGAAAUAUUGGC - 35
• Evidence: experimental ; Illumina [2]

Mature mml-miR-195-3p

• Accession: MIMAT0026838
• Description: Macaca mulatta mml-miR-195-3p mature miRNA
• Sequence: 53 - CCAAUAUUGGCUGUGCUGCUCCA - 75
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45