Stem-loop mml-mir-196b

Accession

MI0007660

Description

Macaca mulatta mml-mir-196b precursor miRNA

Literature search

2 open access papers mention mml-mir-196b
(2 sentences)

Sequence

51873 reads, 409 reads per million, 8 experiments

acuggucggugauuUAGGUAGUUUCCUGUUGUUGGGauccaccuuucucuCGACAGCACGACACUGCCUUCAuua
.......(((((...(((((((.((.(((((((((((..........))))))))))).)).)))))))))))).

Structure

acugguc     uuU       U  C           ucca 
       gguga   AGGUAGU UC UGUUGUUGGGa    c
       |||||   ||||||| || |||||||||||     
       uuACU   UCCGUCA AG ACGACAGCucu    c
------a     ---       C  C           cuuu 

Annotation confidence Low

Genome context

chr3: 81000144-81000218 [+]

Mature mml-miR-196b-5p

• Accession: MIMAT0006229
• Description: Macaca mulatta mml-miR-196b-5p mature miRNA
• Sequence: 15 - UAGGUAGUUUCCUGUUGUUGGG - 36
• Evidence: experimental ; Illumina [2]

Mature mml-miR-196b-3p

• Accession: MIMAT0026840
• Description: Macaca mulatta mml-miR-196b-3p mature miRNA
• Sequence: 51 - CGACAGCACGACACUGCCUUCA - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45