Stem-loop mml-mir-212

Accession

MI0007671

Description

Macaca mulatta mml-mir-212 precursor miRNA

Sequence

1148 reads, 15 reads per million, 9 experiments

cggggcaccccgcccggacagcgcgccggcACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCAGGGCCaccgacgccuggccccgcc
((((((...((....)).(((.(((.(((..((((((((..((((((.((((((...(((...))).))))))))))))..))))))))...))).))))))))))))..

Structure

--      accccgcccgga   c   c   -cA        CU      C      ccc   c 
  cggggc            cag gcg cgg   CCUUGGCU  AGACUG UUACUg   ggg  
  ||||||            ||| ||| |||   ||||||||  |||||| ||||||   ||| c
  gccccg            guc cgc gcc   GGGACUGA  UCUGAC AAUgac   ccc  
cc      ------------   -   a   aCC        CC      -      --u   g 

Annotation confidence High

Genome context

chr16: 1943555-1943664 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-212

Mature mml-miR-212-3p

• Accession: MIMAT0006241
• Description: Macaca mulatta mml-miR-212-3p mature miRNA
• Sequence: 71 - UAACAGUCUCCAGUCAGGGCC - 91
• Evidence: experimental ; Illumina [2]

Mature mml-miR-212-5p

• Accession: MIMAT0026847
• Description: Macaca mulatta mml-miR-212-5p mature miRNA
• Sequence: 31 - ACCUUGGCUCUAGACUGCUUACU - 53
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45