Stem-loop mml-mir-216a

Accession

MI0007672

Description

Macaca mulatta mml-mir-216a precursor miRNA

Sequence

319 reads, 6 reads per million, 8 experiments

gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGAgauguucauacaaucccucACAGUGGUCUCUGGGAUUACGcuaaacagagcaauuuccuugcccucgcga
....(((.((..(((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).))))).)).))).......((((....))))

Structure

---------------gaug   g  ag     u         CU   A        ---a   u 
                   gcu ug  uuggc UAAUCUCAG  GGC ACUGUGAg    ugu c
                   ||| ||  ||||| |||||||||  ||| ||||||||    |||  
                   cga ac  aaucG AUUAGGGUC  CUG UGACAcuc    aca a
agcgcucccguuccuuuaa   g  -a     C         -U   G        ccua   u 

Annotation confidence Low

Genome context

chr13: 56964578-56964687 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-216a

Mature mml-miR-216a-5p

• Accession: MIMAT0006242
• Description: Macaca mulatta mml-miR-216a-5p mature miRNA
• Sequence: 19 - UAAUCUCAGCUGGCAACUGUGA - 40
• Evidence: experimental ; Illumina [2]

Mature mml-miR-216a-3p

• Accession: MIMAT0026848
• Description: Macaca mulatta mml-miR-216a-3p mature miRNA
• Sequence: 60 - ACAGUGGUCUCUGGGAUUACG - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45