Stem-loop mml-mir-218-1

Accession

MI0007675

Description

Macaca mulatta mml-mir-218-1 precursor miRNA mir-218

Gene
family

RF00255; mir-218

Sequence

14961 reads, 102 reads per million, 9 experiments

aauguagcgagauuuucugUUGUGCUUGAUCUAACCAUGUgguugcgagguaugaguaaaacAUGGUUCCGUCAAGCACCAUGgaacgucacgcagcuuucuaca
......(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).)))...........

Structure

-----aaugua   a   u      U         CU        gg    gag 
           gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc   g
           ||| ||| |||||| |||||||||  ||||||||  ||||   u
           cgc cug aagGUA CACGAACUG  UUGGUAca  aaug   a
acaucuuucga   a   c      C         CC        -a    agu 

Annotation confidence High

Genome context

chr5: 19895038-19895142 [+]

Mature mml-miR-218-5p

• Accession: MIMAT0002574
• Description: Macaca mulatta mml-miR-218-5p mature miRNA
• Sequence: 20 - UUGUGCUUGAUCUAACCAUGU - 40
• Evidence: experimental ; Illumina [2]

Mature mml-miR-218-1-3p

• Accession: MIMAT0031080
• Description: Macaca mulatta mml-miR-218-1-3p mature miRNA
• Sequence: 63 - AUGGUUCCGUCAAGCACCAUG - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45