Stem-loop mml-mir-222

Accession

MI0007680

Description

Macaca mulatta mml-mir-222 precursor miRNA mir-221

Gene
family

RF00651; mir-221

Literature search

18 open access papers mention mml-mir-222
(26 sentences)

Sequence

675956 reads, 945.0 reads per million, 151 experiments

gcugcuggaagguauagguacccucaauGGCUCAGUAGCCAGUGUAGAUCcugucuuucguaaucagcAGCUACAUCUGGCUACUGGGUCUCUgauggcaucuucuagcu
...((((((((((.......((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).)).)))))))))).

Structure

gcu          auaggua  c   au              -     AUC   ucuu 
   gcuggaaggu       cc uca  GGCUCAGUAGCCAG UGUAG   cug    u
   ||||||||||       || |||  |||||||||||||| |||||   |||    c
   cgaucuucua       gg agU  CUGGGUCAUCGGUC ACAUC   gac    g
--u          ------c  u   CU              U     GAc   uaau 

Annotation confidence High

Genome context

X: 45693001-45693110 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-222

Mature mml-miR-222-5p

• Accession: MIMAT0026849
• Description: Macaca mulatta mml-miR-222-5p mature miRNA
• Sequence: 29 - GGCUCAGUAGCCAGUGUAGAUC - 50
• Evidence: experimental ; Illumina [2]

Mature mml-miR-222-3p

• Accession: MIMAT0006250
• Description: Macaca mulatta mml-miR-222-3p mature miRNA
• Sequence: 69 - AGCUACAUCUGGCUACUGGGUCUCU - 93
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45