Stem-loop mml-mir-329-1

Accession

MI0007695

Description

Macaca mulatta mml-mir-329-1 precursor miRNA

Sequence

240 reads, 2 reads per million, 7 experiments

gugguaccugaaggGAGGUUUUCUGGGUUUCUGUUUCuuuaaugaggaugaAACACACCUGGUUAACCUCUUUuccaguaucaa
.((((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))))).

Structure

g      cu           UU      UUC      u  aa 
 ugguac  gaaggGAGGUU  CUGGGU   UGUUUC uu  u
 ||||||  |||||||||||  ||||||   |||||| ||   
 acuaug  cuUUUCUCCAA  GGUCCA   ACAAag ag  g
a      ac           UU      --C      u  ga 

Annotation confidence Medium

Genome context

chr7: 163362091-163362174 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from mml-mir-329-1

Mature mml-miR-329-3p

• Accession: MIMAT0006269
• Description: Macaca mulatta mml-miR-329-3p mature miRNA
• Sequence: 52 - AACACACCUGGUUAACCUCUUU - 73
• Evidence: experimental ; Illumina [2]

Mature mml-miR-329-1-5p

• Accession: MIMAT0026852
• Description: Macaca mulatta mml-miR-329-1-5p mature miRNA
• Sequence: 15 - GAGGUUUUCUGGGUUUCUGUUUC - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45