Stem-loop mml-mir-338

Accession

MI0007701

Description

Macaca mulatta mml-mir-338 precursor miRNA mir-338

Gene
family

RF00686; mir-338

Sequence

63534 reads, 382 reads per million, 9 experiments

ucuccAACAAUAUCCUGGUGCUGAGUGaugacucaggugacUCCAGCAUCAGUGAUUUUGUUGaaga
(((.((((((.(((((((((((((((.((.......)).))).))))))))).))).)))))).)))

Structure

   c      U   -         -   G  ga 
ucu cAACAA AUC CUGGUGCUG AGU au  c
||| |||||| ||| ||||||||| ||| ||  u
aga GUUGUU UAG GACUACGAC Uca ug  c
   a      U   U         C   g  ga 

Annotation confidence High

Genome context

chr16: 74986911-74986977 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-338

Mature mml-miR-338-5p

• Accession: MIMAT0006277
• Description: Macaca mulatta mml-miR-338-5p mature miRNA
• Sequence: 6 - AACAAUAUCCUGGUGCUGAGUG - 27
• Evidence: not_experimental

Mature mml-miR-338-3p

• Accession: MIMAT0006278
• Description: Macaca mulatta mml-miR-338-3p mature miRNA
• Sequence: 42 - UCCAGCAUCAGUGAUUUUGUUG - 63
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8