Stem-loop mml-mir-379

Accession

MI0007727

Description

Macaca mulatta mml-mir-379 precursor miRNA mir-379

Gene
family

RF04292; mir-379

Literature search

1 open access papers mention mml-mir-379
(1 sentences)

Sequence

238962 reads, 1724 reads per million, 8 experiments

agagaUGGUAGACUAUGGAACGUAGGcguuaugauuuuugaccUAUGUAACAUGGUCCACUAACucu
((((.((((.(((((((..(((((((((..........)).)))))))..))))))).)))).))))

Structure

    a    A       GA       -  uuau 
agag UGGU GACUAUG  ACGUAGG cg    g
|||| |||| |||||||  ||||||| ||     
ucuC AUCA CUGGUAC  UGUAUcc gu    a
    A    C       AA       a  uuuu 

Annotation confidence Medium

Genome context

chr7: 163357370-163357436 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from mml-mir-379

Mature mml-miR-379-5p

• Accession: MIMAT0006308
• Description: Macaca mulatta mml-miR-379-5p mature miRNA
• Sequence: 6 - UGGUAGACUAUGGAACGUAGG - 26
• Evidence: experimental ; Illumina [2]

Mature mml-miR-379-3p

• Accession: MIMAT0026865
• Description: Macaca mulatta mml-miR-379-3p mature miRNA
• Sequence: 44 - UAUGUAACAUGGUCCACUAAC - 64
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45