Stem-loop mml-mir-412

Accession

MI0007736

Description

Macaca mulatta mml-mir-412 precursor miRNA

Literature search

1 open access papers mention mml-mir-412
(1 sentences)

Sequence

9245 reads, 14.0 reads per million, 109 experiments

cugggguacggggauggaUGGUCGACCAGUUGGAAAGUAAUUGuuucuaauGUACUUCACCUGGUCCACUAGCcguccguauccgcugcag
...((((((..((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))))))))).......

Structure

----cug      gg      a    C      U   AA    -    u 
       ggguac  ggaugg UGGU GACCAG UGG  AGUA AUUG u
       ||||||  |||||| |||| |||||| |||  |||| ||||  
       ccuaug  ccugcC AUCA CUGGUC ACU  UCAU uaau u
gacgucg      --      G    C      C   --    G    c 

Annotation confidence High

Genome context

7: 163285560-163285650 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from mml-mir-412

Mature mml-miR-412-5p

• Accession: MIMAT0026871
• Description: Macaca mulatta mml-miR-412-5p mature miRNA
• Sequence: 19 - UGGUCGACCAGUUGGAAAGUAAUUG - 43
• Evidence: experimental ; Illumina [2]

Mature mml-miR-412-3p

• Accession: MIMAT0006318
• Description: Macaca mulatta mml-miR-412-3p mature miRNA
• Sequence: 52 - GUACUUCACCUGGUCCACUAGC - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45