miRBase entry: mml-mir-485

Stem-loop mml-mir-485

Accession

MI0007758

Description

Macaca mulatta mml-mir-485 precursor miRNA mir-485

Gene
family?

RF04296; mir-485

Sequence

1608 reads, 12 reads per million, 8 experiments

acuuggagAGAGGCUGGCCGUGAUGAAUUCgauucaucaaagcgaGUCAUACACGGCUCUCCUCUCUuuuagu
(((.(((((((((..(((((((((((.((((...........)))))))).)))))))..))))))))).)))

Structure

   u         CU       -    A    auuc 
acu ggagAGAGG  GGCCGUG AUGA UUCg    a
||| |||||||||  ||||||| |||| ||||    u
uga uuUCUCUCC  UCGGCAC UACU Gagc    c
   u         UC       A    -    gaaa

Annotation confidence High

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Genome context

chr7: 163389434-163389506 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mml-mir-485

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-485-5p

Accession	MIMAT0006342
Description	Macaca mulatta mml-miR-485-5p mature miRNA
Sequence	9 - AGAGGCUGGCCGUGAUGAAUUC - 30
Evidence	not_experimental
Database links
Predicted targets

Mature mml-miR-485-3p

Accession	MIMAT0006343
Description	Macaca mulatta mml-miR-485-3p mature miRNA
Sequence	46 - GUCAUACACGGCUCUCCUCUCU - 67
Evidence	not_experimental

References

PubMed ID: 18186931
Identification of novel homologous microRNA genes in the rhesus macaque genome
Yue J, Sheng Y, Orwig KE
BMC Genomics (2008) 9:8