Stem-loop mml-mir-488

Accession

MI0007762

Description

Macaca mulatta mml-mir-488 precursor miRNA mir-488

Gene
family

RF00861; mir-488

Literature search

1 open access papers mention mml-mir-488
(1 sentences)

Sequence

4736 reads, 35 reads per million, 9 experiments

gagaaucaucucuCCCAGAUAAUGGCACUCUCAAACaaguuuccaaguuguUUGAAAGGCUAUUUCUUGGUCagaugacucuc
((((.((((((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..)))))).))))

Structure

    a      cu  C   U      A  C        g  u 
gaga ucaucu  CC AGA AAUGGC CU UCAAACaa uu  
|||| ||||||  || ||| |||||| || |||||||| || c
cucu aguaga  GG UCU UUAUCG GA AGUUuguu aa  
    c      CU  U   -      -  A        g  c 

Annotation confidence High

Genome context

chr1: 190531966-190532048 [+]

Mature mml-miR-488-3p

• Accession: MIMAT0006348
• Description: Macaca mulatta mml-miR-488-3p mature miRNA
• Sequence: 52 - UUGAAAGGCUAUUUCUUGGUC - 72
• Evidence: experimental ; Illumina [2]

Mature mml-miR-488-5p

• Accession: MIMAT0026882
• Description: Macaca mulatta mml-miR-488-5p mature miRNA
• Sequence: 14 - CCCAGAUAAUGGCACUCUCAAAC - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45