Stem-loop mml-mir-494

Accession

MI0007768

Description

Macaca mulatta mml-mir-494 precursor miRNA

Literature search

1 open access papers mention mml-mir-494
(10 sentences)

Sequence

335 reads, 4 reads per million, 9 experiments

gauacucgaaggagAGGUUGUCCGUGUUGUCUUCUCUuuauuuaugaUGAAACAUACACGGGAAACCUCuucuuuaguauc
((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))

Structure

      c            G       -   C   -  Uuu 
gauacu gaaggagAGGUU UCCGUGU UGU UUC UC   a
|||||| |||||||||||| ||||||| ||| ||| ||   u
cuauga uuucuuCUCCAA GGGCACA ACA AAG ag   u
      -            A       U   -   U  uau 

Annotation confidence Not enough data

Genome context

chr7: 163364071-163364151 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mml-mir-494

Mature mml-miR-494-3p

• Accession: MIMAT0006356
• Description: Macaca mulatta mml-miR-494-3p mature miRNA
• Sequence: 48 - UGAAACAUACACGGGAAACCUC - 69
• Evidence: experimental ; Illumina [2]

Mature mml-miR-494-5p

• Accession: MIMAT0026885
• Description: Macaca mulatta mml-miR-494-5p mature miRNA
• Sequence: 15 - AGGUUGUCCGUGUUGUCUUCUCU - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45