Stem-loop mml-mir-501

Accession

MI0007775

Description

Macaca mulatta mml-mir-501 precursor miRNA

Literature search

4 open access papers mention mml-mir-501
(5 sentences)

Sequence

10959 reads, 23.0 reads per million, 134 experiments

gcucuuccucucuAAUCCUUUGUCCCUGGGUGAGAGUgcuuucugaaugcAGUGCACCCAGGCAAGGAUUCUgagagggugagc
((((.(((((((.(((((((.(..((((((((..(.(((.........))).).))))))))))))))))..))))))).))))

Structure

    u       -u       U UC        AG G   uuu 
gcuc uccucuc  AAUCCUU G  CCUGGGUG  A Ugc   c
|||| |||||||  ||||||| |  ||||||||  | |||   u
cgag gggagag  UUAGGAA C  GGACCCAC  U Acg   g
    u       UC       - --        -G G   uaa 

Annotation confidence High

Genome context

X: 49798627-49798710 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from mml-mir-501

Mature mml-miR-501-5p

• Accession: MIMAT0006364
• Description: Macaca mulatta mml-miR-501-5p mature miRNA
• Sequence: 14 - AAUCCUUUGUCCCUGGGUGAGAGU - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-501-3p

• Accession: MIMAT0026889
• Description: Macaca mulatta mml-miR-501-3p mature miRNA
• Sequence: 51 - AGUGCACCCAGGCAAGGAUUCU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45