miRBase entry: mml-mir-518e

Stem-loop mml-mir-518e


Accession
MI0007793
Description
Macaca mulatta mml-mir-518e precursor miRNA


Sequence

718684 reads, 6497.0 reads per million, 66 experiments
ucucaggcugugacCCUCUAGAGGGAAGCGAUUUCUgugaucugaaagaaaagAAAAUGGUUCCCUUUAGAGUGUuacuguuugaga
((((((((.(((((.((((((((((((.((.(((((....(((...)))..))))).)).)))))))))))).))))).))))))))

Structure
        u     C            G  A     guga   g 
ucucaggc gugac CUCUAGAGGGAA CG UUUCU    ucu  
|||||||| ||||| |||||||||||| || |||||    ||| a
agaguuug cauUG GAGAUUUCCCUU GU AAAga    aga  
        u     U            G  A     --aa   a 


Annotation confidence High
Do you think this miRNA is real?

Genome context
19: 53520110-53520196 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from mml-mir-518e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-518e-5p

Accession MIMAT0051638
Description Macaca mulatta mml-miR-518e-5p mature miRNA
Sequence 15 - CCUCUAGAGGGAAGCGAUUUCU - 36
Evidence not_experimental

Mature mml-miR-518e-3p

Accession MIMAT0006382
Description Macaca mulatta mml-miR-518e-3p mature miRNA
Sequence 54 - AAAAUGGUUCCCUUUAGAGUGU - 75
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8