Stem-loop mml-mir-539a

Accession

MI0007815

Description

Macaca mulatta mml-mir-539a precursor miRNA

Literature search

1 open access papers mention mml-mir-539a
(1 sentences)

Sequence

15920 reads, 27.0 reads per million, 87 experiments

auacuugaGGAGAAAUUAUCCUUGGUGUGUucgcuuuauuuaugaugaAUCAUACAAGGACAAUUUCUUUUugaguau
(((((((((((((((((.((((((.(((((((((.........).)))).)))))))))).)))))))))))))))))

Structure

                 A      G    -    - uuu 
auacuugaGGAGAAAUU UCCUUG UGUG Uucg c   a
||||||||||||||||| |||||| |||| |||| |   u
uaugaguUUUUCUUUAA AGGAAC AUAC Aagu g   u
                 C      -    U    a uau 

Annotation confidence High

Genome context

7: 163267510-163267587 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mml-mir-539a

Mature mml-miR-539a-5p

• Accession: MIMAT0006405
• Description: Macaca mulatta mml-miR-539a-5p mature miRNA
• Sequence: 9 - GGAGAAAUUAUCCUUGGUGUGU - 30
• Evidence: not_experimental

Mature mml-miR-539a-3p

• Accession: MIMAT0051648
• Description: Macaca mulatta mml-miR-539a-3p mature miRNA
• Sequence: 49 - AUCAUACAAGGACAAUUUCUUUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8