Stem-loop mml-mir-545

Accession

MI0007818

Description

Macaca mulatta mml-mir-545 precursor miRNA

Literature search

1 open access papers mention mml-mir-545
(1 sentences)

Sequence

482 reads, 1.0 reads per million, 70 experiments

cccagccuggcacauuaguaggccUCAGUAAAUGUUUAUUAGAUGaauaaaugaaugacucaUCAGCAAACAUUUAUUGUGUGCcugcuaaagugagcuccacagg
.....((((((((.((((((((((.((((((((((((.((.(((((.............))))))).)))))))))))).).))))))))).))).....).))))

Structure

cccag    - -----   a         - U            A  A     auaaa 
     ccug g     cac uuaguaggc c CAGUAAAUGUUU UU GAUGa     u
     |||| |     ||| ||||||||| | |||||||||||| || |||||     g
     ggac c     gug aaucgucCG G GUUAUUUACAAA GA CUacu     a
-----    a cucga   a         U U            C  -     cagua 

Annotation confidence High

Genome context

X: 71376429-71376534 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-545

Mature mml-miR-545-5p

• Accession: MIMAT0051649
• Description: Macaca mulatta mml-miR-545-5p mature miRNA
• Sequence: 25 - UCAGUAAAUGUUUAUUAGAUG - 45
• Evidence: not_experimental

Mature mml-miR-545-3p

• Accession: MIMAT0006409
• Description: Macaca mulatta mml-miR-545-3p mature miRNA
• Sequence: 63 - UCAGCAAACAUUUAUUGUGUGC - 84
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8