Stem-loop mml-mir-550a

Accession

MI0007826

Description

Macaca mulatta mml-mir-550a precursor miRNA

Literature search

1 open access papers mention mml-mir-550a
(1 sentences)

Sequence

733 reads, 3.0 reads per million, 80 experiments

ugaugcuuugcuggcuggugcAGUGCCUGAGGGGGUAAGAGCCcuguuguuguaagauagUGUCUUACUCCCUCAGGCACAUcuccagcaagu
.........(((.(((((.(..((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))..).))))).)))

Structure

ugaugcuuu   g     u cA                  G C     gu 
         gcu gcugg g  GUGCCUGAGGGGGUAAGA C cuguu  u
         ||| ||||| |  |||||||||||||||||| | |||||  g
         uga cgacc c  CACGGACUCCCUCAUUCU G gauag  u
---------   a     u UA                  - U     aa 

Annotation confidence High

Genome context

3: 85424028-85424120 [+]

Mature mml-miR-550a-5p

• Accession: MIMAT0006418
• Description: Macaca mulatta mml-miR-550a-5p mature miRNA
• Sequence: 22 - AGUGCCUGAGGGGGUAAGAGCC - 43
• Evidence: experimental ; Illumina [2]

Mature mml-miR-550a-3p

• Accession: MIMAT0026897
• Description: Macaca mulatta mml-miR-550a-3p mature miRNA
• Sequence: 61 - UGUCUUACUCCCUCAGGCACAU - 82
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45