Stem-loop mml-mir-890

Accession

MI0007924

Description

Macaca mulatta mml-mir-890 precursor miRNA

Literature search

2 open access papers mention mml-mir-890
(4 sentences)

Sequence

912 reads, 3.0 reads per million, 36 experiments

ugcccUACUUGGAAAGGCACCAGUUACUuagauuacacguAACUGUUCCCUUUCUGAGUAGAguaaggcuua
.((((((((((((((((...(((((((...........)))))))...))))))))))))).....)))...

Structure

--u   -----             CAC       Uuag 
   gcc     cUACUUGGAAAGG   CAGUUAC    a
   |||     |||||||||||||   |||||||    u
   cgg     GAUGAGUCUUUCC   GUCAAug    u
auu   aaugA             CUU       caca 

Annotation confidence High

Genome context

X: 142032962-142033033 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-890

Mature mml-miR-890-5p

• Accession: MIMAT0006529
• Description: Macaca mulatta mml-miR-890-5p mature miRNA
• Sequence: 6 - UACUUGGAAAGGCACCAGUUACU - 28
• Evidence: experimental ; Illumina [2]

Mature mml-miR-890-3p

• Accession: MIMAT0026913
• Description: Macaca mulatta mml-miR-890-3p mature miRNA
• Sequence: 41 - AACUGUUCCCUUUCUGAGUAGA - 62
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45