Stem-loop mml-mir-940

Accession

MI0007936

Description

Macaca mulatta mml-mir-940 precursor miRNA

Literature search

1 open access papers mention mml-mir-940
(1 sentences)

Sequence

12185 reads, 8.0 reads per million, 124 experiments

guggggugugggcccggccccaGGAGCGGGGCCUGGGCAGCCccguguguugaggaaggAAGGCAGGGCCCCCGCUCCCCgggccugaccccac
(((((((..((((((((.....((((((((((((.(.(..((((.........))..))..).).))).))))))))))))))))).)))))))

Structure

       gu        cccca         -   G G AG  --  gug 
guggggu  gggcccgg     GGAGCGGGG CCU G C  CC  cc   u
|||||||  ||||||||     ||||||||| ||| | |  ||  ||   g
cacccca  uccgggCC     CCUCGCCCC GGG C G  gg  gg   u
       -g        -----         C   A G AA  aa  agu 

Annotation confidence High

Genome context

20: 2310320-2310413 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-940

Mature mml-miR-940-5p

• Accession: MIMAT0051669
• Description: Macaca mulatta mml-miR-940-5p mature miRNA
• Sequence: 23 - GGAGCGGGGCCUGGGCAGCC - 42
• Evidence: not_experimental

Mature mml-miR-940-3p

• Accession: MIMAT0006541
• Description: Macaca mulatta mml-miR-940-3p mature miRNA
• Sequence: 60 - AAGGCAGGGCCCCCGCUCCCC - 80
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8