Stem-loop vvi-MIR845e

Accession

MI0007978

Description

Vitis vinifera vvi-MIR845e precursor miRNA

Literature search

4 open access papers mention vvi-MIR845e
(7 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments

agaacgcacauuaauuaucccuagggccaugggauaaacaaaaaccuugaaaaaacaaguuagcacacccuagaaugguucuagcacgauuacuaaccuaUGGCUCUGAUACCAAUUGAUGggaaaaacuc
........((((((((.....((((((((((((............((((......))))..........((((((...))))))............)))))))))))).....))))))))..........

Structure

--agaacgca        auccc            auaaacaaaaaccuugaaaaaacaaguuagcacacc      u 
          cauuaauu     uagggccauggg                                    cuagaa  
          ||||||||     ||||||||||||                                    |||||| g
          GUAGUUAA     GUCUCGGUaucc                                    gaucuu  
cucaaaaagg        CCAUA            ------------------------aaucauuagcac      g 

Annotation confidence Not enough data

Genome context

chr5: 13374677-13374807 [+]

Mature vvi-miR845e

• Accession: MIMAT0006583
• Description: Vitis vinifera vvi-miR845e mature miRNA
• Sequence: 101 - UGGCUCUGAUACCAAUUGAUG - 121
• Evidence: not_experimental

References

1. PubMed ID: 17721507
   The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
   "Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro"
   "Nature (2007) 449:463-467