Stem-loop cel-mir-1818

Accession

MI0007980

Description

Caenorhabditis elegans cel-mir-1818 precursor miRNA

Sequence

22 reads, 15 reads per million, 7 experiments

cuggaaagaguggccuuuUGUGGUCUUCAUGCCAUGAUUUUaucacucaaacugauaaaaucauaguuuggaaaccucgacaggcuuuucuuuucuu
..((((((((.(((((.(((.(((.((((.((.((((((((((((.......)))))))))))).)).)))).))).))).))))).))))))))..

Structure

cu        u     u   U   C    U  C            cu 
  ggaaagag ggccu uUG GGU UUCA GC AUGAUUUUauca  c
  |||||||| ||||| ||| ||| |||| || ||||||||||||  a
  cuuuucuu ucgga agc cca aggu ug uacuaaaauagu  a
uu        u     c   u   a    u  a            ca 

Annotation confidence Not enough data

Comments

This sequence was erroneously named mir-802 in [1].

Genome context

chrI: 13980858-13980954 [-]

Mature cel-miR-1818

• Accession: MIMAT0006585
• Description: Caenorhabditis elegans cel-miR-1818 mature miRNA
• Sequence: 19 - UGUGGUCUUCAUGCCAUGAUUUU - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18042455
   Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2
   "Zhang L, Ding L, Cheung TH, Dong MQ, Chen J, Sewell AK, Liu X, Yates JR 3rd, Han M"
   "Mol Cell (2007) 28:598-613