Stem-loop cel-mir-1818

Accession

MI0007980

Description

Caenorhabditis elegans cel-mir-1818 precursor miRNA

Sequence

437 reads, 19.0 reads per million, 55 experiments

cUGGAAAGAGUGGCCUUUUGUGgucuucaugccaugauuuuaucacucaaacuGAUAAAAUCAUAGUUUGGAAACcucgacaggcuuuucuuuucuu
..((((((((.(((((.(((.(((.((((.((.((((((((((((.......)))))))))))).)).)))).))).))).))))).))))))))..

Structure

cU        U     U   U   c    u  c            cu 
  GGAAAGAG GGCCU UUG Ggu uuca gc augauuuuauca  c
  |||||||| ||||| ||| ||| |||| || ||||||||||||  a
  cuuuucuu ucgga agc cCA AGGU UG UACUAAAAUAGu  a
uu        u     c   u   A    U  A            ca 

Annotation confidence Not enough data

Comments

This sequence was erroneously named mir-802 in [1].

Genome context

chrI: 13980858-13980954 [-]

Mature cel-miR-1818-5p

• Accession: MIMAT0006585
• Description: Caenorhabditis elegans cel-miR-1818-5p mature miRNA
• Sequence: 2 - UGGAAAGAGUGGCCUUUUGUG - 22
• Evidence: experimental ; 454 [1]

Mature cel-miR-1818-3p

• Accession: MIMAT0053608
• Description: Caenorhabditis elegans cel-miR-1818-3p mature miRNA
• Sequence: 54 - GAUAAAAUCAUAGUUUGGAAAC - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18042455
   Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2
   "Zhang L, Ding L, Cheung TH, Dong MQ, Chen J, Sewell AK, Liu X, Yates JR 3rd, Han M"
   "Mol Cell (2007) 28:598-613