Stem-loop bmo-mir-133

Accession

MI0008345

Description

Bombyx mori bmo-mir-133 precursor miRNA

Literature search

13 open access papers mention bmo-mir-133
(24 sentences)

Sequence

7695 reads, 114.0 reads per million, 27 experiments

aaagcgagagcguuguucgcuuuAGCUGGUUGACUUCGGGUCAAAUugucauuuucauaucauUUGGUCCCCUUCAACCAGCUGUaguuaacaucugcuuu
......((((((.((((.(((.(((((((((((....(((((((((...............)))))).)))..))))))))))).))).))))..))))))

Structure

aaagcg      -u    c   u           CUUC   -      ugucau 
      agagcg  uguu gcu uAGCUGGUUGA    GGG UCAAAU      u
      ||||||  |||| ||| |||||||||||    ||| ||||||      u
      uuucgu  acaa uga GUCGACCAACU    CCC GGUUua      u
------      cu    u   U           --UC   U      cuauac 

Annotation confidence High

Genome context

dbj|BSVE01000004.1|: 11529803-11529903 [+]

Mature bmo-miR-133-5p

• Accession: MIMAT0053130
• Description: Bombyx mori bmo-miR-133-5p mature miRNA
• Sequence: 24 - AGCUGGUUGACUUCGGGUCAAAU - 46
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-133-3p

• Accession: MIMAT0007901
• Description: Bombyx mori bmo-miR-133-3p mature miRNA
• Sequence: 64 - UUGGUCCCCUUCAACCAGCUGU - 85
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18507836
   Identification and characteristics of microRNAs from Bombyx mori
   He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y
   BMC Genomics (2008) 9:248


2. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148