Stem-loop xla-mir-1b-1

Accession

MI0008372

Description

Xenopus laevis xla-mir-1b-1 precursor miRNA

Literature search

1 open access papers mention xla-mir-1b-1
(1 sentences)

Sequence

220551 reads, 11388.0 reads per million, 8 experiments

CAUACUUCUUUAUAUGCCCAUAcugaaugccaaugcuaUGGAAUGUUAAGAAGUAUGUA
((((((((((.((((..((((((...........).))))).)))).))))))))))..

Structure

--          U    GC     - ugaa 
  CAUACUUCUU AUAU  CCAUA c    u
  |||||||||| ||||  ||||| |    g
  GUAUGAAGAA UGUA  GGUau g    c
AU          U    -A     c uaac 

Annotation confidence High

Genome context

chr2L: 65219815-65219873 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-1b-1

Mature xla-miR-1b-5p

• Accession: MIMAT0052066
• Description: Xenopus laevis xla-miR-1b-5p mature miRNA
• Sequence: 1 - CAUACUUCUUUAUAUGCCCAUA - 22
• Evidence: not_experimental

Mature xla-miR-1b-3p

• Accession: MIMAT0011135
• Description: Xenopus laevis xla-miR-1b-3p mature miRNA
• Sequence: 39 - UGGAAUGUUAAGAAGUAUGUA - 59
• Evidence: not_experimental

References

1. 
   "Biasci D, Giudetti G, Barsacchi G, Andreazzoli M"
   (2008) None: