Stem-loop xla-mir-133d-1

Accession

MI0008376

Description

Xenopus laevis xla-mir-133d-1 precursor miRNA

Literature search

1 open access papers mention xla-mir-133d-1
(2 sentences)

Sequence

453122 reads, 11208.0 reads per million, 18 experiments

cugguugcgCUGGUGAAAAGGAACCACAUCAacccagcaaaaggauUUGGUCCCCUUCAACCAGCCGCaacuggc
(((((((((((((((((..(((.(((.(((.............))).))))))..))).))))).))))))))).

Structure

-         -     -   AA   A   C   Aaccc 
 cugguugcg CUGGU GAA  GGA CCA AUC     a
 ||||||||| ||||| |||  ||| ||| |||     g
 ggucaaCGC GACCA CUU  CCU GGU uag     c
c         C     A   CC   -   U   gaaaa 

Annotation confidence High

Genome context

chr2L: 65219390-65219464 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-133d-1

Mature xla-miR-133d-1-5p

• Accession: MIMAT0052068
• Description: Xenopus laevis xla-miR-133d-1-5p mature miRNA
• Sequence: 10 - CUGGUGAAAAGGAACCACAUCA - 31
• Evidence: not_experimental

Mature xla-miR-133d-3p

• Accession: MIMAT0011138
• Description: Xenopus laevis xla-miR-133d-3p mature miRNA
• Sequence: 47 - UUGGUCCCCUUCAACCAGCCGC - 68
• Evidence: not_experimental

References

1. 
   "Biasci D, Giudetti G, Barsacchi G, Andreazzoli M"
   (2008) None: