Stem-loop xla-mir-23a-1

Accession

MI0008383

Description

Xenopus laevis xla-mir-23a-1 precursor miRNA

Literature search

3 open access papers mention xla-mir-23a-1
(4 sentences)

Sequence

19622 reads, 1038.0 reads per million, 18 experiments

ccgacagcGGGGGAUUCCUGGAGAUGGGAUUUuauuuuugcagccaauaaAUCACAUUGCCAGGGAUUUCCAacuguc
..(((((..((((((((((((.((((.(((((................))))).)))).))))))))))))..)))))

Structure

cc     cG            A    G     uauuuuu 
  gacag  GGGGAUUCCUGG GAUG GAUUU       g
  |||||  |||||||||||| |||| |||||        
  cuguc  CCUUUAGGGACC UUAC CUAaa       c
--     aA            G    A     uaaccga 

Annotation confidence High

Genome context

chr3L: 127493447-127493524 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from xla-mir-23a-1

Mature xla-miR-23a-5p

• Accession: MIMAT0046546
• Description: Xenopus laevis xla-miR-23a-5p mature miRNA
• Sequence: 9 - GGGGGAUUCCUGGAGAUGGGAUUU - 32
• Evidence: experimental ; Illumina [1]

Mature xla-miR-23a-3p

• Accession: MIMAT0011145
• Description: Xenopus laevis xla-miR-23a-3p mature miRNA
• Sequence: 51 - AUCACAUUGCCAGGGAUUUCCA - 72
• Evidence: not_experimental

References

1. 
   "Biasci D, Giudetti G, Barsacchi G, Andreazzoli M"
   (2008) None: