Stem-loop bmo-mir-1923

Accession

MI0008393

Description

Bombyx mori bmo-mir-1923 precursor miRNA

Literature search

2 open access papers mention bmo-mir-1923
(2 sentences)

Sequence

19 reads, 7 reads per million, 3 experiments

ucgaaacuugccauuuaaaauggugccuucgauaacuuuuuucauuaauuuuuaaugacUAAUCGCGUACCGUUGCAUAGCCGUGGCgg
........((((((....((((((((...((((.....(..(((((((...)))))))..))))).))))))))........)))))).

Structure

ucgaaacu      ----uuaa        cuu    aacuu uu       u 
        ugccau        aauggugc   cgau     u  ucauuaa  
        ||||||        ||||||||   ||||     |  ||||||| u
        gCGGUG        UUGCCAUG   GCUA     A  aguaauu  
-------g      CCGAUACG        --C    ----- Uc       u 

Annotation confidence Not enough data

Genome context

NW_004590653.1: 148-236 [-]

Mature bmo-miR-1923

• Accession: MIMAT0007932
• Description: Bombyx mori bmo-miR-1923 mature miRNA
• Sequence: 60 - UAAUCGCGUACCGUUGCAUAGCCGUGGC - 87
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 18714353
   The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
   Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
   PLoS One (2008) 3:e2997