Stem-loop ptr-let-7a-2

Accession

MI0008398

Description

Pan troglodytes ptr-let-7a-2 precursor miRNA

Literature search

5 open access papers mention ptr-let-7a-2
(26 sentences)

Sequence

agguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaucaagggagauaacuguacagccuccuagcuuucc
.((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).))).))

Structure

a  uU   G   U             uagaauuac   aa 
 gg  GAG UAG AGGUUGUAUAGUU         auc  g
 ||  ||| ||| |||||||||||||         |||   
 cc  uuc auc uccgacaugucaa         uag  g
-  -u   g   c             ---------   ag 

Annotation confidence Not enough data

Genome context

chr11: 122642010-122642080 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ptr-let-7a-2

Mature ptr-let-7a

• Accession: MIMAT0007936
• Description: Pan troglodytes ptr-let-7a mature miRNA
• Sequence: 5 - UGAGGUAGUAGGUUGUAUAGUU - 26
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70