Stem-loop ptr-let-7a-3

Accession

MI0008399

Description

Pan troglodytes ptr-let-7a-3 precursor miRNA

Literature search

5 open access papers mention ptr-let-7a-3
(26 sentences)

Sequence

ggUGAGGUAGUAGGUUGUAUAGUUuggggcucugcccugcuaugggauaacuauacaaucuacugucuuuccu
((.(((((((((((((((((((((((((((...)))))).........))))))))))))))))))))).)).

Structure

-  U                     ---------      u 
 gg GAGGUAGUAGGUUGUAUAGUU         uggggc  
 || |||||||||||||||||||||         |||||| c
 cc uucugucaucuaacauaucaa         gucccg  
u  u                     uaggguauc      u 

Annotation confidence Not enough data

Genome context

chr22: 32894782-32894854 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ptr-let-7a-3

Mature ptr-let-7a

• Accession: MIMAT0007936
• Description: Pan troglodytes ptr-let-7a mature miRNA
• Sequence: 3 - UGAGGUAGUAGGUUGUAUAGUU - 24
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70