Stem-loop ptr-let-7e

Accession

MI0008403

Description

Pan troglodytes ptr-let-7e precursor miRNA

Literature search

4 open access papers mention ptr-let-7e
(9 sentences)

Sequence

ccgggcUGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucacuauacggccuccuagcuuuccccagg
(((((..(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))..))).))

Structure

  -   cU   G                U  -------  a g 
cc ggg  GAG UAGGAGGUUGUAUAGU ga       gg g a
|| |||  ||| |||||||||||||||| ||       || |  
gg ccc  uuc auccuccggcauauca cu       cc c c
  a   cu   g                -  agaggaa  - a 

Annotation confidence Not enough data

Genome context

chr19: 53915593-53915670 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ptr-let-7e

Mature ptr-let-7e

• Accession: MIMAT0007940
• Description: Pan troglodytes ptr-let-7e mature miRNA
• Sequence: 7 - UGAGGUAGGAGGUUGUAUAGUU - 28
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70