Stem-loop ptr-let-7f-2

Accession

MI0008405

Description

Pan troglodytes ptr-let-7f-2 precursor miRNA

Literature search

4 open access papers mention ptr-let-7f-2
(9 sentences)

Sequence

20760506 reads, 181806.0 reads per million, 24 experiments

ugugggaUGAGGUAGUAGAUUGUAUAGUUuuagggucauaccccaucuuggagauaaCUAUACAGUCUACUGUCUUUCccac
.((((((.((((((((((((((((((((((((((((........))))))))....))))))))))))))))))))))))))

Structure

u      U                    ----        cau 
 guggga GAGGUAGUAGAUUGUAUAGU    Uuuagggu   a
 |||||| ||||||||||||||||||||    ||||||||    
 caccCU UUCUGUCAUCUGACAUAUCa    agguucua   c
-      -                    auag        ccc 

Annotation confidence Not enough data

Genome context

chrX: 53204052-53204133 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ptr-let-7f-2

Mature ptr-let-7f-5p

• Accession: MIMAT0007941
• Description: Pan troglodytes ptr-let-7f-5p mature miRNA
• Sequence: 8 - UGAGGUAGUAGAUUGUAUAGUU - 29
• Evidence: not_experimental

Mature ptr-let-7f-2-3p

• Accession: MIMAT0052267
• Description: Pan troglodytes ptr-let-7f-2-3p mature miRNA
• Sequence: 58 - CUAUACAGUCUACUGUCUUUC - 78
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70