Stem-loop ptr-mir-103-2

Accession

MI0008409

Description

Pan troglodytes ptr-mir-103-2 precursor miRNA

Literature search

1 open access papers mention ptr-mir-103-2
(1 sentences)

Sequence

2448737 reads, 21267.0 reads per million, 24 experiments

ugugcuuucAGCUUCUUUACAGUGCUGCCUUGUagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAaagaacca
.((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).))..

Structure

-u  g      --   U  U           C   U g a 
  gu cuuucA  GCU CU UACAGUGCUGC UUG a c u
  || ||||||  ||| || ||||||||||| ||| | | u
  ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
ac  a      AU   -  C           -   - g a 

Annotation confidence High

Genome context

chr20: 3789622-3789698 [+]

Mature ptr-miR-103-2-5p

• Accession: MIMAT0052220
• Description: Pan troglodytes ptr-miR-103-2-5p mature miRNA
• Sequence: 10 - AGCUUCUUUACAGUGCUGCCUUGU - 33
• Evidence: not_experimental

Mature ptr-miR-103-3p

• Accession: MIMAT0002446
• Description: Pan troglodytes ptr-miR-103-3p mature miRNA
• Sequence: 47 - AGCAGCAUUGUACAGGGCUAUGA - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70