Stem-loop ptr-mir-1182

Accession

MI0008416

Description

Pan troglodytes ptr-mir-1182 precursor miRNA

Sequence

gggacuugucacugccugucuccucccucuccagcagcgacuggauucuggaguccaucuaGAGGGUCUUGGGAGGGAUGUGACuguugggaagcc
.((.(((.(((..((..(((.(.((((((.((((....((((...(((((((.....))))))))))))))))))))).).))).))))).)))))

Structure

g  a   g   cu  cu   u c      u    cagc    gga       g 
 gg cuu uca  gc  guc c ucccuc ccag    gacu   uucugga u
 || ||| |||  ||  ||| | |||||| ||||    ||||   ||||||| c
 cc gaa ggu  ug  CAG G AGGGAG GGUU    CUGG   GAGaucu c
-  -   g   --  -u   U U      -    ----    ---       a 

Annotation confidence Not enough data

Genome context

chr1: 210030464-210030559 [-]

Mature ptr-miR-1182

• Accession: MIMAT0007950
• Description: Pan troglodytes ptr-miR-1182 mature miRNA
• Sequence: 62 - GAGGGUCUUGGGAGGGAUGUGAC - 84
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70