miRBase entry: ptr-mir-1248

Stem-loop ptr-mir-1248


Accession
MI0008454
Description
Pan troglodytes ptr-mir-1248 precursor miRNA
Gene family
MIPF0000622; mir-1248


Sequence

uuACCUUCUUGUAUAAGCACUGUGCUAAAauugcagacacuaggaccaugucuugguuuuugcaauaaugcuagcagaguacacacaagaagaaaaguaacagca
....((((((((....(.(((.(((((..((((((((.((((((((...)))))))).)))))))).....))))).))).)..)))))))).............

Structure
---------uuAC        AUAA C   G     ---AA        c        c 
             CUUCUUGU    G ACU UGCUA     auugcaga acuaggac  
             ||||||||    | ||| |||||     |||||||| |||||||| a
             gaagaaca    c uga acgau     uaacguuu ugguucug  
acgacaaugaaaa        --ca a   g     cguaa        u        u 


Annotation confidence Not enough data
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Genome context
chr3: 190917810-190917914 [+]

Database links

Mature ptr-miR-1248

Accession MIMAT0007974
Description Pan troglodytes ptr-miR-1248 mature miRNA
Sequence 3 - ACCUUCUUGUAUAAGCACUGUGCUAAA - 29
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70