Stem-loop ptr-mir-1253

Accession

MI0008458

Description

Pan troglodytes ptr-mir-1253 precursor miRNA

Sequence

agcagcaagagauagaauccaaaAGAGAAGAAGAUCAGCCUGCAgauguggacugcuaaaugcaggcugaucuucuccccuuugggauucucuuaugagaagcc
.((..((.((((..((((((.((((.(.((((((((((((((((....(((....)))..)))))))))))))))).).)))).)))))))))).))....)).

Structure

a  --ag  a    ua      a    A A                gaug   a 
 gc    ca gaga  gaaucc aaAG G AGAAGAUCAGCCUGCA    ugg c
 ||    || ||||  |||||| |||| | ||||||||||||||||    |||  
 cg    gu uucu  cuuagg uuuc c ucuucuagucggacgu    auc u
c  aaga  a    --      g    c c                --aa   g 

Annotation confidence Not enough data

Genome context

chr17: 2808442-2808545 [-]

Mature ptr-miR-1253

• Accession: MIMAT0007978
• Description: Pan troglodytes ptr-miR-1253 mature miRNA
• Sequence: 24 - AGAGAAGAAGAUCAGCCUGCA - 44
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70