Stem-loop ptr-mir-1289-1

Accession

MI0008489

Description

Pan troglodytes ptr-mir-1289-1 precursor miRNA

Sequence

uucucaauuuuuaguaggaauuaaaaacaaaacugguaaaugcagacucuuggauuccacccccagagaaucccuaaaccgggggUGGAGUCCAGGAAUCUGCAUUUUagaaaguacccagggugauucugauacauugggaac
((((((((...((...(((((((........(((...(((((((((.(((((((((((((((((................))))))))))))))))).))))))))).....)))........)))))))..)).)))))))).

Structure

-        uuu  gua       aaaacaaa   --ggu         c                 agagaau 
 uucucaau   ua   ggaauua        acu     aaaugcaga ucuuggauuccaccccc       c
 ||||||||   ||   |||||||        |||     ||||||||| |||||||||||||||||        
 aaggguua   au   ucuuagu        uga     UUUACGUCU AGGACCUGAGGUggggg       c
c        --c  -ag       gggaccca   aagaU         A                 ccaaauc 

Annotation confidence Not enough data

Genome context

chr20: 36898069-36898212 [-]

Mature ptr-miR-1289

• Accession: MIMAT0008007
• Description: Pan troglodytes ptr-miR-1289 mature miRNA
• Sequence: 86 - UGGAGUCCAGGAAUCUGCAUUUU - 108
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70