Stem-loop ptr-mir-1289-2

Accession

MI0008490

Description

Pan troglodytes ptr-mir-1289-2 precursor miRNA

Sequence

ccacgguccuaguuaaaaaggcacauuccuagacccugccucagaacuacugaacagagucacugggugUGGAGUCCAGGAAUCUGCAUUUUuaccccugucgcccccgc
....(((..(((.((((((.(((.((((((.(((.(((((((((.(((.((....)))))..))))).)))).))).)))))).))).))))))...)))..))).....

Structure

-ccac   cc   --u      g   c      a   c    -     -a   a  g 
     ggu  uag   uaaaaa gca auuccu gac cugc cucag  acu cu a
     |||  |||   |||||| ||| |||||| ||| |||| |||||  ||| ||  
     ccg  guc   auUUUU CGU UAAGGA CUG GGUg ggguc  uga ga a
cgccc   cu   ccc      A   C      C   A    u     ac   -  c 

Annotation confidence Not enough data

Genome context

chr5: 133363271-133363380 [-]

Mature ptr-miR-1289

• Accession: MIMAT0008007
• Description: Pan troglodytes ptr-miR-1289 mature miRNA
• Sequence: 70 - UGGAGUCCAGGAAUCUGCAUUUU - 92
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70