miRBase entry: ptr-mir-129-2

Stem-loop ptr-mir-129-2


Accession
MI0008494
Description
Pan troglodytes ptr-mir-129-2 precursor miRNA


Sequence

32469 reads, 283.0 reads per million, 22 experiments
gcccuucgcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacucaauagccggAAGCCCUUACCCCAAAAAGCAUUugcggagggcg
((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).

Structure
-             -       C   CU      ---     acau 
 gcccuucgcgaau CUUUUUG GGU  GGGCUU   GCugu    a
 ||||||||||||| ||||||| |||  ||||||   |||||     
 cgggaggcguUUA GAAAAAC CCA  CCCGAA   cgaua    a
g             C       C   UU      ggc     acuc 


Annotation confidence High
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Genome context
chr11: 43765047-43765135 [+]

Database links

Mature ptr-miR-129-5p

Accession MIMAT0008010
Description Pan troglodytes ptr-miR-129-5p mature miRNA
Sequence 14 - CUUUUUGCGGUCUGGGCUUGC - 34
Evidence not_experimental

Mature ptr-miR-129-2-3p

Accession MIMAT0052284
Description Pan troglodytes ptr-miR-129-2-3p mature miRNA
Sequence 56 - AAGCCCUUACCCCAAAAAGCAUU - 78
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70