Stem-loop ptr-mir-1302-2

Accession

MI0008517

Description

Pan troglodytes ptr-mir-1302-2 precursor miRNA

Literature search

1 open access papers mention ptr-mir-1302-2
(2 sentences)

Sequence

ggaugcccaguuaguuugaauucuagauaaacaacgaauaauuucguagcauaaauaugucccaagcuuaguUUGGGACAUACUUAUGCUAAAaaacauuauugguuguuuaucugagauucaaaauuaagcauuuu
.(((((....((((((((((((.((((((((((((.((((((....((((((((.((((((((((((...)))))))))))).))))))))......)))))).)))))))))))).))))).))))))))))))..

Structure

-g     ccag       -     c            g      --uucg        a            u 
  gaugc    uuaguuu gaauu uagauaaacaac aauaau      uagcauaa uaugucccaagc  
  |||||    ||||||| ||||| |||||||||||| ||||||      |||||||| |||||||||||| u
  uuacg    aauuaaa cuuag gucuauuuguug uuauua      AUCGUAUU AUACAGGGUUug  
uu     ----       a     a            g      caaaAA        C            a 

Annotation confidence Not enough data

Genome context

chr12: 1666-1802 [+]

Mature ptr-miR-1302

• Accession: MIMAT0008021
• Description: Pan troglodytes ptr-miR-1302 mature miRNA
• Sequence: 73 - UUGGGACAUACUUAUGCUAAA - 93
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70