miRBase entry: ptr-mir-1303

Stem-loop ptr-mir-1303


Accession
MI0008524
Description
Pan troglodytes ptr-mir-1303 precursor miRNA


Sequence

9615 reads, 96.0 reads per million, 24 experiments
gcUGGGCAACAUAGCGAGACCucaacucuacaauuuuuuuuuuuuuaaUUUUAGAGACGGGGUCUUGcucuguugccaggcuuu
(((.(((((((.(((((((((((..(((((.((((...........)))).)))))..))))))))))).))))))).)))...

Structure
---   G       U           aa     c    uuuu 
   gcU GGCAACA AGCGAGACCuc  cucua aauu    u
   ||| ||||||| |||||||||||  ||||| ||||    u
   cgg ccguugu ucGUUCUGGGG  GAGAU UUaa    u
uuu   a       c           CA     U    uuuu 


Annotation confidence Low
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Genome context
chr5: 154939534-154939617 [+]

Database links

Mature ptr-miR-1303-5p

Accession MIMAT0052286
Description Pan troglodytes ptr-miR-1303-5p mature miRNA
Sequence 3 - UGGGCAACAUAGCGAGACC - 21
Evidence not_experimental

Mature ptr-miR-1303-3p

Accession MIMAT0008022
Description Pan troglodytes ptr-miR-1303-3p mature miRNA
Sequence 49 - UUUUAGAGACGGGGUCUUG - 67
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70