Stem-loop ptr-mir-137

Accession

MI0008538

Description

Pan troglodytes ptr-mir-137 precursor miRNA

Literature search

5 open access papers mention ptr-mir-137
(9 sentences)

Sequence

2578 reads, 35.0 reads per million, 13 experiments

gguccucugacucucuucggugACGGGUAUUCUUGGGUGGAUAAUacggauuacguugUUAUUGCUUAAGAAUACGCGUAgucgaggagaguaccagcggc
...((.((((((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..)))))))))))..))).)).

Structure

ggu  u   --           ug   G             G      -  g 
   cc cug  acucucuucgg  ACG GUAUUCUUGGGUG AUAAUa cg a
   || |||  |||||||||||  ||| ||||||||||||| |||||| || u
   gg gac  ugagaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc u
--c  c   ca           gA   G             -      u  a 

Annotation confidence High

Genome context

chr1: 98643379-98643479 [-]

Mature ptr-miR-137-5p

• Accession: MIMAT0052291
• Description: Pan troglodytes ptr-miR-137-5p mature miRNA
• Sequence: 23 - ACGGGUAUUCUUGGGUGGAUAAU - 45
• Evidence: not_experimental

Mature ptr-miR-137-3p

• Accession: MIMAT0008033
• Description: Pan troglodytes ptr-miR-137-3p mature miRNA
• Sequence: 59 - UUAUUGCUUAAGAAUACGCGUA - 80
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70