Stem-loop ptr-mir-142

Accession

MI0008543

Description

Pan troglodytes ptr-mir-142 precursor miRNA

Sequence

gacagugcagucacccauaaaguagaaagcacuacuaacagcacuggagggUGUAGUGUUUCCUACUUUAUGGAugaguguacugu
.((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).))))))))

Structure

g        g   c           a         uaa ag a 
 acagugca uca ccauaaaguag aagcacuac   c  c c
 |||||||| ||| ||||||||||| |||||||||   |  |  
 ugucaugu agu GGUAUUUCAUC UUUGUGAUG   g  g u
-        g   A           C         -Ug ga g 

Annotation confidence Not enough data

Genome context

chr17: 57615879-57615964 [-]

Mature ptr-miR-142

• Accession: MIMAT0008037
• Description: Pan troglodytes ptr-miR-142 mature miRNA
• Sequence: 52 - UGUAGUGUUUCCUACUUUAUGGA - 74
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70