Stem-loop ptr-mir-151

Accession

MI0008551

Description

Pan troglodytes ptr-mir-151 precursor miRNA

Sequence

33352 reads, 344.0 reads per million, 24 experiments

uuuccugcccUCGAGGAGCUCACAGUCUAGUaugucucauccccuaCUAGACUGAAGCUCCUUGAGGAcagggauggucauacucaccu
.((((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).)))))).(((.......))).

Structure

--------------u      c            CA          u ucu 
               uuccug ccUCGAGGAGCU  CAGUCUAGUa g   c
               |||||| ||||||||||||  |||||||||| |    
               agggac GGAGUUCCUCGA  GUCAGAUCau c   a
uccacucauacuggu      A            -A          c ccu 

Annotation confidence High

Genome context

chr8: 143374066-143374154 [-]

Mature ptr-miR-151-5p

• Accession: MIMAT0052300
• Description: Pan troglodytes ptr-miR-151-5p mature miRNA
• Sequence: 11 - UCGAGGAGCUCACAGUCUAGU - 31
• Evidence: not_experimental

Mature ptr-miR-151-3p

• Accession: MIMAT0008045
• Description: Pan troglodytes ptr-miR-151-3p mature miRNA
• Sequence: 47 - CUAGACUGAAGCUCCUUGAGGA - 68
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70