Stem-loop ptr-mir-191

Accession

MI0008564

Description

Pan troglodytes ptr-mir-191 precursor miRNA

Literature search

2 open access papers mention ptr-mir-191
(17 sentences)

Sequence

cggcuggacagcgggCAACGGAAUCCCAAAAGCAGCUGuugucuccagagcauuccagcugcgcuuggauuucguccccugcucuccugcc
.(((.(((.((((((..(((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))..)))))).))).)))

Structure

c   u   c      CA         C  AA       --u   cu 
 ggc gga agcggg  ACGGAAUCC AA  GCAGCUG   ugu  c
 ||| ||| ||||||  ||||||||| ||  |||||||   |||  c
 ccg ccu ucgucc  ugcuuuagg uu  cgucgac   acg  a
-   u   c      cc         -  cg       cuu   ag 

Annotation confidence Not enough data

Genome context

chr3: 50084686-50084776 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ptr-mir-191

Mature ptr-miR-191

• Accession: MIMAT0008056
• Description: Pan troglodytes ptr-miR-191 mature miRNA
• Sequence: 16 - CAACGGAAUCCCAAAAGCAGCUG - 38
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70