Stem-loop ptr-mir-199a-1

Accession

MI0008571

Description

Pan troglodytes ptr-mir-199a-1 precursor miRNA

Literature search

2 open access papers mention ptr-mir-199a-1
(5 sentences)

Sequence

gccaacccaguguucagacuaccuguucaggaggcucucaauguguACAGUAGUCUGCACAUUGGUUAgg
.((...(((((((.((((((((.(((.((.(((...)))..))...))))))))))).)))))))...))

Structure

g  aac       u        c   --u  -g   g 
 cc   ccagugu cagacuac ugu   ca  gag  
 ||   ||||||| |||||||| |||   ||  ||| c
 gg   GGUUACA GUCUGAUG ACA   gu  cuc  
-  AUU       C        -   ugu  aa   u 

Annotation confidence Not enough data

Genome context

chr19: 11396978-11397047 [-]

Mature ptr-miR-199a-3p

• Accession: MIMAT0009192
• Description: Pan troglodytes ptr-miR-199a-3p mature miRNA
• Sequence: 47 - ACAGUAGUCUGCACAUUGGUUA - 68
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70