Stem-loop ptr-mir-219-2

Accession

MI0008585

Description

Pan troglodytes ptr-mir-219-2 precursor miRNA

Sequence

acucaggggcuucgccacUGAUUGUCCAAACGCAAUUCUuguacgagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGUggcugagcuccgg
.....(((((((.(((((.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..)))))))).))))).)))))))..

Structure

acuca       c     U   U     AA           uac a   u 
     ggggcuu gccac GAU GUCCA  CGCAAUUCUug   g guc  
     ||||||| ||||| ||| |||||  |||||||||||   | ||| g
     ccucgag cggUG CUA CAGGU  GUGUUAAGAgc   c cgg  
---gg       u     U   -     CG           caa -   c 

Annotation confidence Not enough data

Genome context

chr9: 106531883-106531978 [-]

Mature ptr-miR-219-5p

• Accession: MIMAT0009193
• Description: Pan troglodytes ptr-miR-219-5p mature miRNA
• Sequence: 19 - UGAUUGUCCAAACGCAAUUCU - 39
• Evidence: not_experimental

Mature ptr-miR-219-2-3p

• Accession: MIMAT0009194
• Description: Pan troglodytes ptr-miR-219-2-3p mature miRNA
• Sequence: 62 - AGAAUUGUGGCUGGACAUCUGU - 83
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70