Stem-loop ptr-mir-300

Accession

MI0008596

Description

Pan troglodytes ptr-mir-300 precursor miRNA

Sequence

gcuacuugaagagagguaauccuucaugcauuugcuuuacuugcaaugauUAUACAAGGGCAGACUCUCUCUggggagcaaa
(((.((((.((((((....(((((....((((.((.......)))))).......)))))....)))))).)))).)))...

Structure

---   a    a      guaa     ---caug    u  uu 
   gcu cuug agagag    uccuu       cauu gc  u
   ||| |||| ||||||    |||||       |||| ||  a
   cga gggU UCUCUC    GGGAA       guaa cg  c
aaa   g    C      AGAC     CAUAUua    -  uu 

Annotation confidence Not enough data

Genome context

chr14: 86289611-86289692 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ptr-mir-300

Mature ptr-miR-300

• Accession: MIMAT0008083
• Description: Pan troglodytes ptr-miR-300 mature miRNA
• Sequence: 51 - UAUACAAGGGCAGACUCUCUCU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70