Stem-loop ptr-mir-302b

Accession

MI0008600

Description

Pan troglodytes ptr-mir-302b precursor miRNA

Literature search

1 open access papers mention ptr-mir-302b
(6 sentences)

Sequence

gcucccuucaacuuuaacauggaagugcuuucugugacuuuaaaagUAAGUGCUUCCAUGUUUUAGUAGgag
.....((((.(((..(((((((((((((((.((...........)).)))))))))))))))..))).))))

Structure

gcucc    a   uu               u  guga 
     cuuc acu  aacauggaagugcuu cu    c
     |||| |||  ||||||||||||||| ||    u
     gagG UGA  UUGUACCUUCGUGAA ga    u
-----    A   UU               U  aaau 

Annotation confidence Not enough data

Genome context

chr4: 115711790-115711861 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ptr-mir-302b

Mature ptr-miR-302b

• Accession: MIMAT0008087
• Description: Pan troglodytes ptr-miR-302b mature miRNA
• Sequence: 47 - UAAGUGCUUCCAUGUUUUAGUAG - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70