Stem-loop ptr-mir-320b-2

Accession

MI0008609

Description

Pan troglodytes ptr-mir-320b-2 precursor miRNA

Literature search

1 open access papers mention ptr-mir-320b-2
(8 sentences)

Sequence

uguuauuuuuugucuucuaccuaagaauucugucucuuaggcuuucucuucccagauuucccaaaguugggAAAAGCUGGGUUGAGAGGGCAAaaggaaaaaaaaagaauucugucucugacauaauuagauaggga
(.((((((..((((.........((((((((...((((..((((((((..(((((.(((((((....)))))))..)))))..))))))))..))))........))))))))......)))).....)))))).).

Structure

- g      ---uu    uucuaccua        -----guc    ag        uu     -a       a 
 u uuauuu     uguc         agaauucu        ucuu  gcuuucuc  cccag  uuuccca a
 | ||||||     ||||         ||||||||        ||||  ||||||||  |||||  |||||||  
 g gauaga     acag         ucuuaaga        ggaa  CGGGAGAG  GGGUC  AAAgggu g
a g      uuaau    ---ucucug        aaaaaaaa    AA        UU     GA       u 

Annotation confidence Not enough data

Genome context

chr1: 203209046-203209182 [-]

Mature ptr-miR-320b

• Accession: MIMAT0008094
• Description: Pan troglodytes ptr-miR-320b mature miRNA
• Sequence: 72 - AAAAGCUGGGUUGAGAGGGCAA - 93
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70