Stem-loop ptr-mir-324

Accession

MI0008616

Description

Pan troglodytes ptr-mir-324 precursor miRNA

Literature search

3 open access papers mention ptr-mir-324
(3 sentences)

Sequence

2609 reads, 24.0 reads per million, 24 experiments

cugacuaugccucccCGCAUCCCCUAGGGCAUUGGUGUaaagcuggagacccACUGCCCCAGGUGCUGCUGGggguuguagu
...((((((.(((((.(((.(.(((.(((((.(((.((..........))))).))))).))).).))).))))).))))))

Structure

cug      c     C   U C   A     U   U  aaag 
   acuaug cuccc GCA C CCU GGGCA UGG GU    c
   |||||| ||||| ||| | ||| ||||| ||| ||     
   ugaugu gggGG CGU G GGA CCCGU Acc ca    u
---      u     U   C U   C     C   -  gagg 

Annotation confidence High

Genome context

chr17: 7477349-7477430 [-]

Mature ptr-miR-324-5p

• Accession: MIMAT0052324
• Description: Pan troglodytes ptr-miR-324-5p mature miRNA
• Sequence: 16 - CGCAUCCCCUAGGGCAUUGGUGU - 38
• Evidence: not_experimental

Mature ptr-miR-324-3p

• Accession: MIMAT0008098
• Description: Pan troglodytes ptr-miR-324-3p mature miRNA
• Sequence: 53 - ACUGCCCCAGGUGCUGCUGG - 72
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70